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Cheap Flights from Tokyo (HND) to El Nido (ENI)

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Compare Tokyo Haneda to El Nido flight deals

Find the cheapest month or even day of the year to fly to El Nido

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Flight deals from Tokyo Haneda to El Nido

Looking for a cheap last-minute deal or the best return flight from Tokyo Haneda to El Nido? Find the lowest prices on one-way and return tickets right here.
El Nido.$658 per passenger.Departing Tue, 17 Jun, returning Mon, 23 Jun.Return flight with Air China and Air Swift.Outbound indirect flight with Air China, departs from Tokyo Haneda on Tue, 17 Jun, arriving in El Nido.Inbound indirect flight with Air Swift, departs from El Nido on Mon, 23 Jun, arriving in Tokyo Haneda.Price includes taxes and charges.From $658, select.
El Nido.$777 per passenger.Departing Sun, 24 Aug, returning Wed, 27 Aug.Return flight with Japan Airlines and Air Swift.Outbound indirect flight with Japan Airlines, departs from Tokyo Haneda on Sun, 24 Aug, arriving in El Nido.Inbound indirect flight with Air Swift, departs from El Nido on Wed, 27 Aug, arriving in Tokyo Haneda.Price includes taxes and charges.From $777, select.
El Nido.$788 per passenger.Departing Sun, 21 Sep, returning Wed, 24 Sep.Return flight with Skymark Airlines and Air Swift.Outbound indirect flight with Skymark Airlines, departs from Tokyo Haneda on Sun, 21 Sep, arriving in El Nido.Inbound indirect flight with Air Swift, departs from El Nido on Wed, 24 Sep, arriving in Tokyo Haneda.Price includes taxes and charges.From $788, select.
El Nido.$827 per passenger.Departing Tue, 1 Jul, returning Sat, 5 Jul.Return flight with HK Express and Cebgo.Outbound indirect flight with HK Express, departs from Tokyo Haneda on Tue, 1 Jul, arriving in El Nido.Inbound indirect flight with Cebgo, departs from El Nido on Sat, 5 Jul, arriving in Tokyo Haneda.Price includes taxes and charges.From $827, select.
El Nido.$996 per passenger.Departing Mon, 20 Oct, returning Fri, 24 Oct.Return flight with HK Express and Cebgo.Outbound indirect flight with HK Express, departs from Tokyo Haneda on Mon, 20 Oct, arriving in El Nido.Inbound indirect flight with Cebgo, departs from El Nido on Fri, 24 Oct, arriving in Tokyo Haneda.Price includes taxes and charges.From $996, select.
El Nido.$1,047 per passenger.Departing Wed, 19 Nov, returning Fri, 21 Nov.Return flight with Philippine Airlines and Air Swift.Outbound indirect flight with Philippine Airlines, departs from Tokyo Haneda on Wed, 19 Nov, arriving in El Nido.Inbound indirect flight with Air Swift, departs from El Nido on Fri, 21 Nov, arriving in Tokyo Haneda.Price includes taxes and charges.From $1,047, select.
El Nido.$1,057 per passenger.Departing Sat, 21 Jun, returning Wed, 2 Jul.Return flight with HK Express and Air Swift.Outbound indirect flight with HK Express, departs from Tokyo Haneda on Sat, 21 Jun, arriving in El Nido.Inbound indirect flight with Air Swift, departs from El Nido on Wed, 2 Jul, arriving in Tokyo Haneda.Price includes taxes and charges.From $1,057, select.
El Nido.$1,064 per passenger.Departing Sat, 13 Sep, returning Mon, 13 Oct.Return flight with Philippine Airlines and Air Swift.Outbound indirect flight with Philippine Airlines, departs from Tokyo Haneda on Sat, 13 Sep, arriving in El Nido.Inbound indirect flight with Air Swift, departs from El Nido on Mon, 13 Oct, arriving in Tokyo Haneda.Price includes taxes and charges.From $1,064, select.

Find the cheapest month to fly from Tokyo Haneda to El Nido

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Tokyo Haneda to El Nido flights are currently cheapest in June.
May
from $1,062
Jun
from $654
Jul
from $823
Aug
from $773
Sep
from $784
Oct
from $991
Nov
from $1,041
Dec
from $1,270
Jan
Find prices
Feb
from $1,062
Mar
Find prices
Apr
Find prices

Tokyo Haneda to El Nido: Alternative routes

Compare routes from Tokyo Haneda to El Nido below. You may find an airport to fly into that's cheaper, faster, or easier than El Nido.

Tokyo to El Nido: Flight information

The things to know before you go.
Cheapest flight found$654
Cheapest month to flyJune

Finding cheap flights from Tokyo Haneda to El Nido: Frequently asked questions

The best price we found for a return flight from Tokyo Haneda to El Nido is $654. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.
Currently, there are no airlines that fly direct from Tokyo Haneda to El Nido. But we found flights with one or more stops from $654.
As of May 2025, there are no flights flying from Tokyo Haneda to El Nido.
The cheapest month to fly from Tokyo Haneda to El Nido is usually May 2025.
After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Tokyo Haneda Airport to El Nido Airport on Tuesday, 17 June 2025.
No airlines currently offer direct flights between Tokyo Haneda Airport and El Nido Airport. Most routes have one or more stops.
We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to El Nido but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.
We crunched all the numbers in our flight calendar and it looks like the cheapest time to book a flight to El Nido is around 40 days in advance, so don’t leave your flight to the last minute.
Currently, Air China offers the cheapest flight tickets to El Nido.

How to find cheap flights to El Nido from Tokyo Haneda

Looking for cheap tickets from Tokyo Haneda to El Nido? Here are a few tips on how to secure the best flight price and make your journey as smooth as possible.

  • Simply hit 'search'. From British Airways to international carriers like Emirates, we compare all major airlines along with the most popular online travel agents to find the cheapest plane tickets from Tokyo Haneda to El Nido. And with us there are no hidden fees - what you see is what you pay.
  • Compare flight deals to El Nido from Tokyo Haneda from over 1,000 providers. Then choose the cheapest or fastest plane tickets.
  • Flex your dates to find the best Tokyo Haneda-El Nido ticket prices. If you are flexible when it comes to your travel dates, use Skyscanner's 'Whole month' tool to find the cheapest month, and even day to fly to El Nido from Tokyo Haneda.
  • Set up a Price Alert. You can easily track the fare of your cheap Tokyo Haneda-El Nido flights by creating an alert. Whenever prices go down or up, you'll get an email or push notification to help make sure you get the best possible flight deal.
  • Fly without stops. Only interested in direct flights between Tokyo Haneda and El Nido? Make sure to tick 'Direct flights only' when performing a search. If there are direct flights available on the route, these will appear in the results.
  • Find the cheapest Business class flights from Tokyo Haneda and El Nido. We scour the internet for the best Business, Premium Economy and First Class flight fares to El Nido, too. Check the difference in price as you search – you might just chance upon a last-minute low fare. Note that not all cabin classes are available for every destination or airline.
  • Include nearby airports in your search. Widen your search for Tokyo Haneda to El Nido flight deals by selecting the "add nearby airports" option. This will allow you to see flight prices for all the nearest airports at your departure point and your destination and could help you save next time you travel.

    • Combine your flight to El Nido from Tokyo Haneda with hotels and car hire

    Once you've secured your cheap flight ticket from Tokyo Haneda to El Nido, discover the best prices and exclusive rates for hotels in El Nido or nearby. You can also compare hundreds of car hire companies in one go so that you get the best car hire price for your trip.


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Prices shown on this page are estimated lowest prices only. Found in the last 45 days.