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Cheap Flights from Guatemala City (GUA) to San Juan (SJUA)

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      Travellers and cabin class, 1 Adult, Economy

      Compare Guatemala City to San Juan flight deals

      Find the cheapest month or even day of the year to fly to San Juan

      Book the best San Juan fare with no extra fees

      Flight deals from Guatemala City to San Juan

      Looking for a cheap last-minute deal or the best return flight from Guatemala City Airport to San Juan? If you want to travel next month, return fares start from $606. Find the lowest prices on one-way and return tickets right here.
      San Juan.$606 per passenger.Departing Tue, 27 Oct, returning Wed, 20 Jan.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Tue, 27 Oct, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Wed, 20 Jan, arriving in Guatemala City.Price includes taxes and charges.From $606, select.
      San Juan.$606 per passenger.Departing Thu, 17 Sep, returning Wed, 23 Sep.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Thu, 17 Sep, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Wed, 23 Sep, arriving in Guatemala City.Price includes taxes and charges.From $606, select.
      San Juan.$606 per passenger.Departing Wed, 24 Mar, returning Wed, 31 Mar.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Wed, 24 Mar, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Wed, 31 Mar, arriving in Guatemala City.Price includes taxes and charges.From $606, select.
      San Juan.$606 per passenger.Departing Wed, 4 Nov, returning Tue, 10 Nov.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Wed, 4 Nov, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Tue, 10 Nov, arriving in Guatemala City.Price includes taxes and charges.From $606, select.
      San Juan.$606 per passenger.Departing Wed, 31 Mar, returning Wed, 7 Apr.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Wed, 31 Mar, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Wed, 7 Apr, arriving in Guatemala City.Price includes taxes and charges.From $606, select.
      San Juan.$606 per passenger.Departing Thu, 14 Jan, returning Sat, 23 Jan.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Thu, 14 Jan, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Sat, 23 Jan, arriving in Guatemala City.Price includes taxes and charges.From $606, select.
      San Juan.$606 per passenger.Departing Thu, 3 Dec, returning Sun, 6 Dec.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Thu, 3 Dec, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Sun, 6 Dec, arriving in Guatemala City.Price includes taxes and charges.From $606, select.
      San Juan.$606 per passenger.Departing Fri, 16 Oct, returning Tue, 20 Oct.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Fri, 16 Oct, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Tue, 20 Oct, arriving in Guatemala City.Price includes taxes and charges.From $606, select.
      San Juan.$607 per passenger.Departing Fri, 30 Oct, returning Tue, 3 Nov.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Fri, 30 Oct, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Tue, 3 Nov, arriving in Guatemala City.Price includes taxes and charges.From $607, select.
      San Juan.$607 per passenger.Departing Fri, 26 Feb, returning Mon, 1 Mar.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Fri, 26 Feb, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Mon, 1 Mar, arriving in Guatemala City.Price includes taxes and charges.From $607, select.
      San Juan.$608 per passenger.Departing Mon, 31 May, returning Thu, 10 Jun.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Mon, 31 May, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Thu, 10 Jun, arriving in Guatemala City.Price includes taxes and charges.From $608, select.
      San Juan.$612 per passenger.Departing Wed, 10 Feb, returning Wed, 17 Feb.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Wed, 10 Feb, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Wed, 17 Feb, arriving in Guatemala City.Price includes taxes and charges.From $612, select.
      San Juan.$976 per passenger.Departing Sun, 29 Nov, returning Tue, 15 Dec.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Sun, 29 Nov, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Tue, 15 Dec, arriving in Guatemala City.Price includes taxes and charges.From $976, select.
      San Juan.$1,246 per passenger.Departing Mon, 28 Dec, returning Sat, 2 Jan.Return flight with Copa.Outbound indirect flight with Copa, departs from Guatemala City on Mon, 28 Dec, arriving in San Juan Luis Munoz Marin.Inbound indirect flight with Copa, departs from San Juan Luis Munoz Marin on Sat, 2 Jan, arriving in Guatemala City.Price includes taxes and charges.From $1,246, select.

      Find the cheapest month to fly from Guatemala City to San Juan

      We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Guatemala City to San Juan flights are currently cheapest in September.
      Sep
      from $606
      Oct
      from $606
      Nov
      from $606
      Dec
      from $606
      Jan
      from $606
      Feb
      from $612
      Mar
      from $606
      Apr
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      May
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      Jun
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      Jul
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      Aug
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      Alternative Guatemala City to San Juan routes

      Looking for the cheapest, fastest or easiest route from Guatemala City to San Juan? You could fly into the following airports instead.

      San Juan Isla Grande

      1km from central San Juan
      Closest
      Search flights

      San Juan Luis Munoz Marin

      11km from central San Juan
      Cheapest
      from $606
      Search flights

      Roosevelt Roads

      55km from central San Juan
      Search flights

      Ponce

      70km from central San Juan
      Search flights

      Vieques

      82km from central San Juan
      Search flights

      Culebra

      85km from central San Juan
      Search flights

      Guatemala City to San Juan: Flight information

      The things to know before you go.
      Cheapest flight found$606
      Cheapest month to flySeptember

      Finding cheap flights from Guatemala City to San Juan: Frequently asked questions

      There are 6 airports in San Juan: San Juan Isla Grande, San Juan Luis Munoz Marin, Roosevelt Roads, Ponce, Vieques, and Culebra.
      The best price we found for a return flight from Guatemala City to San Juan is $606. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.
      Currently, there are no airlines that fly direct from Guatemala City to San Juan. But we found flights with one or more stops from $606.
      As of September 2026, there are no flights flying from Guatemala City to San Juan.
      The cheapest month to fly from Guatemala City to San Juan is usually September.
      If you're flying from Guatemala City Airport, the cheapest airport near San Juan is San Juan Luis Munoz Marin – which is 11.3 km away from the centre of San Juan. We've found flights into this airport from $606.
      After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Guatemala City Airport to San Juan on Thursday, 17 September 2026.
      No airlines currently offer direct flights between Guatemala City Airport and San Juan. Most routes have one or more stops.
      We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to San Juan but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.

      We crunched all the numbers in our flight calendar and it looks like the cheapest time to book a flight to San Juan is around 40 days in advance, so don’t leave your flight to the last minute.

      In September, the average temperature is usually around 28°C. August is typically the warmest month in San Juan, when it usually averages around 30°C. You can expect the least rain in January. The coldest month is February, with temperatures averaging 22°C. The rainiest month is September.
      Currently, Copa offers the cheapest flight tickets to San Juan.

      Travelling from Guatemala City La Aurora Interantional Airport (GUA) to San Juan: what you need to know

      • Guatemala City La Aurora Interantional Airport is located in Guatemala City. Based in the UTC-4 timezone, San Juan is two hours ahead of Guatemala City.

      • For a stress-free journey, arrive at the airport two hours ahead of international flights and an hour before domestic departures. That way, you won't have to rush to board your GUA to San Juan flight.

      • During popular months like January, you'll want to get to the airport even earlier. Plan to arrive two hours before a domestic departure and four hours ahead of international flights when you fly during peak periods in general.

      • Stopovers are the ideal opportunity to take a break from travelling and possibly even tick a new city off your list. When browsing for plane tickets from GUA to San Juan, uncheck the 'Direct flights only' box to see where you can stop along the way. Top options include:

        • Miami International Airport (MIA)

        • Cancun International Airport (CUN)

        • Santo Domingo Las Americas International Airport (SDQ)

      • Located around 6 kilometres from the centre of Guatemala City, GUA can be reached in about 20 minutes by car (depending on traffic). Travelling on public transport takes roughly 35 minutes.

      • Searching for a hotel close to GUA? If you're catching an early flight from Guatemala City La Aurora Interantional Airport to San Juan, these stays will put you moments from check-in:

      • Guatemala City La Aurora Interantional Airport gets top marks for its on-time performance. 88% of flights that depart GUA arrive at their destination on time.

      How to find the cheapest flights from Guatemala City La Aurora Interantional Airport (GUA) to San Juan

      • $376 is the cheapest price we've seen for a one-way Guatemala City La Aurora Interantional Airport to San Juan flight. A round-trip plane ticket right now is $606. Depending on the availability when you book, these fares can change.

      • Booking early is often the key to finding a cheap flight from GUA to San Juan. Flight prices rise as demand increases, so the closer your departure date, the more it could cost you.

      • If you're flexible with your travel plans, make the most of the 'Whole month' search tool. It'll show you the lowest price across every month when looking for your Guatemala City La Aurora Interantional Airport to San Juan ticket.

      • You don't need to keep checking in to see if fares have dropped when you create a Price Alert. We'll update you as soon as there's an even bigger deal on cheap flights from GUA to San Juan.

      • Tailor your flights with filters. Select your preferred arrival and departure times, airlines and total journey duration. You can also sort your results by 'Fastest,' 'Cheapest' or 'Best' flights from Guatemala City La Aurora Interantional Airport to San Juan.

      Airports in San Juan

      Luis Munoz Marin International Airport (SJU)

      • The distance from Luis Munoz Marin International Airport (SJU) to central San Juan is roughly 11 kilometres. It'll take you around 20 minutes to get to the centre driving.

      • If you're using public transport, expect a journey time of around 1 hour.

      • If you're arriving on a late flight from Guatemala City La Aurora Interantional Airport to San Juan, nothing beats the convenience of staying close to the terminal. Grab your bags from the carousel and then be showered and resting not long after at one of these accommodation options near SJU:

      • Lock in the lowest price by booking your vehicle from Luis Munoz Marin International Airport about two weeks in advance of your flight from GUA to San Juan.

      Best time to go to San Juan

      • It's time to figure out your travel dates for your flight from Guatemala City La Aurora Interantional Airport to San Juan. March is the busiest month to visit San Juan. If you like a more relaxed atmosphere, go in December.

      • Before booking a Guatemala City La Aurora Interantional Airport to San Juan plane ticket, think about the type of weather you enjoy. August is the warmest month in San Juan, with temperatures ranging from 24ºC (75ºF) to 32ºC (90ºF).

      • Search for cheap tickets from GUA to San Juan in February if you'd rather travel during cooler conditions. Temperatures are at their lowest then, ranging between 21ºC (70ºF) and 28ºC (82ºF) on average.

      More about San Juan

      • When it comes to looking for somewhere to rest your head, you'll find the best places to stay in San Juan right here. Browse these hotels as soon as you've booked your flight from Guatemala City La Aurora Interantional Airport to San Juan:

      • Esperanza Beach and Balneario El Escambron are just a couple of the top-rated attractions to put on your San Juan travel itinerary. Continue your sightseeing adventures at Escambron Green.

      Explore more of Puerto Rico

      • You've visited San Juan, now it's time to discover other parts of Puerto Rico. Travel around 113 kilometres west to Aguadilla to tick off its leading sights. From Silla Aguadilla to Bridges Surf Beach and Playa Rompe Olas, you'll have a full itinerary ahead.

      • If there's time to check out another major destination in Puerto Rico, head for Isabela, about 105 kilometres west of San Juan. Playa montones, Shore Island Beach and Guajataca Forest Reserve are highlights.

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      Plan the rest of your trip from Guatemala City to San Juan

      Prices shown on this page are estimated lowest prices only. Found in the last 12 days.